Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pls1Q3V0K9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pls1Q3V0K9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pls1Q3V0K9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pls1Q3V0K9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pls1Q3V0K9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pls1Q3V0K9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pls1Q3V0K9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pls1Q3V0K9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Gm45747-201ENSMUST00000212203 999 ntBASIC17.67■□□□□ 0.42
Pls1Q3V0K9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.67■□□□□ 0.42
Pls1Q3V0K9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.67■□□□□ 0.42
Pls1Q3V0K9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Gm14701-201ENSMUST00000117156 348 ntBASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Gm27301-201ENSMUST00000184012 127 ntBASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.66■□□□□ 0.42
Pls1Q3V0K9 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pls1Q3V0K9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pls1Q3V0K9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pls1Q3V0K9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pls1Q3V0K9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pls1Q3V0K9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.64■□□□□ 0.42
Pls1Q3V0K9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pls1Q3V0K9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pls1Q3V0K9 Gm11025-201ENSMUST00000140773 466 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms