Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm44364-201ENSMUST00000198368 141 ntBASIC13.66□□□□□ -0.22
Chd8Q09XV5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.65□□□□□ -0.22
Chd8Q09XV5 Gm12341-201ENSMUST00000119724 503 ntBASIC13.65□□□□□ -0.22
Chd8Q09XV5 Gm12997-201ENSMUST00000120207 640 ntBASIC13.65□□□□□ -0.22
Chd8Q09XV5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chd8Q09XV5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.65□□□□□ -0.22
Chd8Q09XV5 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Gm5363-201ENSMUST00000211927 938 ntBASIC13.65□□□□□ -0.22
Chd8Q09XV5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd8Q09XV5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chd8Q09XV5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Chd8Q09XV5 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Chd8Q09XV5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.64□□□□□ -0.23
Chd8Q09XV5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Gm24543-201ENSMUST00000103867 82 ntBASIC13.64□□□□□ -0.23
Chd8Q09XV5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chd8Q09XV5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd8Q09XV5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Gm27514-201ENSMUST00000183692 110 ntBASIC13.63□□□□□ -0.23
Chd8Q09XV5 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Gm29649-201ENSMUST00000185649 419 ntBASIC13.63□□□□□ -0.23
Chd8Q09XV5 Gm18893-201ENSMUST00000198416 943 ntBASIC13.63□□□□□ -0.23
Chd8Q09XV5 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.63□□□□□ -0.23
Chd8Q09XV5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.63□□□□□ -0.23
Chd8Q09XV5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Gm8805-201ENSMUST00000117848 313 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms