Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Atf4Q06507 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Atf4Q06507 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.64□□□□□ -0.07
Atf4Q06507 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.64□□□□□ -0.07
Atf4Q06507 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.64□□□□□ -0.07
Atf4Q06507 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.64□□□□□ -0.07
Atf4Q06507 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.64□□□□□ -0.07
Atf4Q06507 Gm43037-201ENSMUST00000196808 250 ntBASIC14.64□□□□□ -0.07
Atf4Q06507 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.64□□□□□ -0.07
Atf4Q06507 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC14.64□□□□□ -0.07
Atf4Q06507 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC14.64□□□□□ -0.07
Atf4Q06507 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.64□□□□□ -0.07
Atf4Q06507 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Atf4Q06507 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atf4Q06507 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Atf4Q06507 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Atf4Q06507 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Atf4Q06507 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Atf4Q06507 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.63□□□□□ -0.07
Atf4Q06507 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.63□□□□□ -0.07
Atf4Q06507 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Atf4Q06507 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.63□□□□□ -0.07
Atf4Q06507 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Atf4Q06507 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.63□□□□□ -0.07
Atf4Q06507 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.63□□□□□ -0.07
Atf4Q06507 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Atf4Q06507 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.62□□□□□ -0.07
Atf4Q06507 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.62□□□□□ -0.07
Atf4Q06507 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Atf4Q06507 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Atf4Q06507 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms