Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cacna1aP97445 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cacna1aP97445 Gm16198-201ENSMUST00000118766 670 ntBASIC14.18□□□□□ -0.14
Cacna1aP97445 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Mir7085-201ENSMUST00000184353 66 ntBASIC14.18□□□□□ -0.14
Cacna1aP97445 Gm27430-201ENSMUST00000184585 107 ntBASIC14.18□□□□□ -0.14
Cacna1aP97445 Gm44333-201ENSMUST00000197168 107 ntBASIC14.18□□□□□ -0.14
Cacna1aP97445 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacna1aP97445 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1aP97445 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Haglr-201ENSMUST00000100000 2085 ntBASIC14.17□□□□□ -0.14
Cacna1aP97445 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Gm5779-201ENSMUST00000218467 910 ntBASIC14.17□□□□□ -0.14
Cacna1aP97445 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.17□□□□□ -0.14
Cacna1aP97445 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1aP97445 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cacna1aP97445 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1aP97445 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Gm2810-201ENSMUST00000118681 990 ntBASIC14.16□□□□□ -0.14
Cacna1aP97445 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1aP97445 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1aP97445 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cacna1aP97445 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1aP97445 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1aP97445 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Cacna1aP97445 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1aP97445 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1aP97445 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1aP97445 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.15□□□□□ -0.14
Cacna1aP97445 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Gm6973-201ENSMUST00000117080 721 ntBASIC14.15□□□□□ -0.14
Cacna1aP97445 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.15□□□□□ -0.14
Cacna1aP97445 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.15□□□□□ -0.14
Cacna1aP97445 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms