Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SgcbP82349 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Gm13036-201ENSMUST00000117799 748 ntBASIC13.72□□□□□ -0.21
SgcbP82349 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.72□□□□□ -0.21
SgcbP82349 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SgcbP82349 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Grk6-207ENSMUST00000225925 2769 ntBASIC13.72□□□□□ -0.21
SgcbP82349 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
SgcbP82349 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
SgcbP82349 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SgcbP82349 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SgcbP82349 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.71□□□□□ -0.21
SgcbP82349 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.71□□□□□ -0.21
SgcbP82349 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.71□□□□□ -0.21
SgcbP82349 Gm18206-201ENSMUST00000207027 926 ntBASIC13.71□□□□□ -0.21
SgcbP82349 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SgcbP82349 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SgcbP82349 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.71□□□□□ -0.21
SgcbP82349 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SgcbP82349 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
SgcbP82349 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SgcbP82349 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SgcbP82349 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SgcbP82349 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SgcbP82349 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SgcbP82349 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SgcbP82349 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SgcbP82349 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.7□□□□□ -0.22
SgcbP82349 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SgcbP82349 Gm11764-201ENSMUST00000120221 623 ntBASIC13.7□□□□□ -0.22
SgcbP82349 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SgcbP82349 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SgcbP82349 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SgcbP82349 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.7□□□□□ -0.22
SgcbP82349 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SgcbP82349 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.69□□□□□ -0.22
SgcbP82349 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms