Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SgcdP82347 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcdP82347 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SgcdP82347 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.3□□□□□ -0.12
SgcdP82347 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SgcdP82347 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcdP82347 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.3□□□□□ -0.12
SgcdP82347 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.29□□□□□ -0.12
SgcdP82347 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Gm13186-201ENSMUST00000118031 316 ntBASIC14.29□□□□□ -0.12
SgcdP82347 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.29□□□□□ -0.12
SgcdP82347 Gm9013-201ENSMUST00000132939 882 ntBASIC14.29□□□□□ -0.12
SgcdP82347 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.29□□□□□ -0.12
SgcdP82347 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.29□□□□□ -0.12
SgcdP82347 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SgcdP82347 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SgcdP82347 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.29□□□□□ -0.12
SgcdP82347 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Phf7-203ENSMUST00000226565 1971 ntBASIC14.29□□□□□ -0.12
SgcdP82347 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcdP82347 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SgcdP82347 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.28□□□□□ -0.12
SgcdP82347 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Gm7153-201ENSMUST00000117092 455 ntBASIC14.28□□□□□ -0.12
SgcdP82347 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.28□□□□□ -0.12
SgcdP82347 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SgcdP82347 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.28□□□□□ -0.12
SgcdP82347 Gm28033-201ENSMUST00000184224 96 ntBASIC14.28□□□□□ -0.12
SgcdP82347 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.28□□□□□ -0.12
SgcdP82347 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms