Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.09□□□□□ -0.15
Lsm3P62311 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.09□□□□□ -0.15
Lsm3P62311 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.09□□□□□ -0.15
Lsm3P62311 Gm7791-201ENSMUST00000219066 539 ntBASIC14.09□□□□□ -0.15
Lsm3P62311 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lsm3P62311 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Lsm3P62311 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm3P62311 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm3P62311 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Lsm3P62311 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lsm3P62311 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Lsm3P62311 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Lsm3P62311 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Lsm3P62311 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Gm27275-201ENSMUST00000184318 272 ntBASIC14.08□□□□□ -0.16
Lsm3P62311 Gm38027-201ENSMUST00000192315 235 ntBASIC14.08□□□□□ -0.16
Lsm3P62311 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lsm3P62311 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lsm3P62311 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Lsm3P62311 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.08□□□□□ -0.16
Lsm3P62311 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Lsm3P62311 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm3P62311 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Lsm3P62311 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lsm3P62311 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Gm44450-201ENSMUST00000199528 114 ntBASIC14.07□□□□□ -0.16
Lsm3P62311 Gm18115-201ENSMUST00000221209 621 ntBASIC14.07□□□□□ -0.16
Lsm3P62311 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lsm3P62311 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Lsm3P62311 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lsm3P62311 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lsm3P62311 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Lsm3P62311 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Lsm3P62311 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm3P62311 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lsm3P62311 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.06□□□□□ -0.16
Lsm3P62311 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lsm3P62311 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm3P62311 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm3P62311 Gm42569-201ENSMUST00000200539 472 ntBASIC14.06□□□□□ -0.16
Lsm3P62311 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lsm3P62311 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms