Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm2P58774 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tpm2P58774 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tpm2P58774 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.72■□□□□ 0.43
Tpm2P58774 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm2P58774 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.71■□□□□ 0.43
Tpm2P58774 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.71■□□□□ 0.43
Tpm2P58774 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm2P58774 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tpm2P58774 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tpm2P58774 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Tpm2P58774 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Tpm2P58774 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tpm2P58774 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.7■□□□□ 0.42
Tpm2P58774 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.7■□□□□ 0.42
Tpm2P58774 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.7■□□□□ 0.42
Tpm2P58774 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm2P58774 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC17.69■□□□□ 0.42
Tpm2P58774 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Tpm2P58774 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tpm2P58774 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.69■□□□□ 0.42
Tpm2P58774 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.69■□□□□ 0.42
Tpm2P58774 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.69■□□□□ 0.42
Tpm2P58774 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.69■□□□□ 0.42
Tpm2P58774 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.69■□□□□ 0.42
Tpm2P58774 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tpm2P58774 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tpm2P58774 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tpm2P58774 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Tpm2P58774 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tpm2P58774 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm2P58774 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.69■□□□□ 0.42
Tpm2P58774 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tpm2P58774 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tpm2P58774 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tpm2P58774 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.68■□□□□ 0.42
Tpm2P58774 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.68■□□□□ 0.42
Tpm2P58774 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.68■□□□□ 0.42
Tpm2P58774 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.68■□□□□ 0.42
Tpm2P58774 Gm18959-201ENSMUST00000208954 655 ntBASIC17.68■□□□□ 0.42
Tpm2P58774 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.68■□□□□ 0.42
Tpm2P58774 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tpm2P58774 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.68■□□□□ 0.42
Tpm2P58774 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.68■□□□□ 0.42
Tpm2P58774 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm2P58774 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Gm45003-201ENSMUST00000205875 2158 ntBASIC17.67■□□□□ 0.42
Tpm2P58774 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms