Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Gm44454-201ENSMUST00000198541 138 ntBASIC14.75□□□□□ -0.05
Cdkn2bP55271 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.75□□□□□ -0.05
Cdkn2bP55271 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.75□□□□□ -0.05
Cdkn2bP55271 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.74□□□□□ -0.05
Cdkn2bP55271 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.74□□□□□ -0.05
Cdkn2bP55271 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.74□□□□□ -0.05
Cdkn2bP55271 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Gm25016-201ENSMUST00000158399 131 ntBASIC14.74□□□□□ -0.05
Cdkn2bP55271 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.74□□□□□ -0.05
Cdkn2bP55271 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.74□□□□□ -0.05
Cdkn2bP55271 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdkn2bP55271 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdkn2bP55271 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkn2bP55271 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkn2bP55271 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkn2bP55271 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkn2bP55271 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkn2bP55271 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkn2bP55271 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Cdkn2bP55271 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkn2bP55271 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkn2bP55271 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdkn2bP55271 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms