Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atoh1P48985 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Atoh1P48985 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.31■□□□□ 0.36
Atoh1P48985 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Atoh1P48985 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atoh1P48985 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atoh1P48985 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atoh1P48985 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atoh1P48985 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atoh1P48985 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
Atoh1P48985 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.31■□□□□ 0.36
Atoh1P48985 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atoh1P48985 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.3■□□□□ 0.36
Atoh1P48985 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Atoh1P48985 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Gm12490-201ENSMUST00000120255 560 ntBASIC17.3■□□□□ 0.36
Atoh1P48985 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.3■□□□□ 0.36
Atoh1P48985 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Gm27838-201ENSMUST00000184829 128 ntBASIC17.3■□□□□ 0.36
Atoh1P48985 Gm7775-201ENSMUST00000218871 853 ntBASIC17.3■□□□□ 0.36
Atoh1P48985 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Atoh1P48985 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.3■□□□□ 0.36
Atoh1P48985 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.3■□□□□ 0.36
Atoh1P48985 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.3■□□□□ 0.36
Atoh1P48985 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atoh1P48985 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Atoh1P48985 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Atoh1P48985 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atoh1P48985 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.29■□□□□ 0.36
Atoh1P48985 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Gm27680-201ENSMUST00000184192 160 ntBASIC17.29■□□□□ 0.36
Atoh1P48985 Gm44344-201ENSMUST00000200287 129 ntBASIC17.29■□□□□ 0.36
Atoh1P48985 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.29■□□□□ 0.36
Atoh1P48985 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.29■□□□□ 0.36
Atoh1P48985 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.29■□□□□ 0.36
Atoh1P48985 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.29■□□□□ 0.36
Atoh1P48985 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atoh1P48985 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Atoh1P48985 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atoh1P48985 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Atoh1P48985 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.28■□□□□ 0.36
Atoh1P48985 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.28■□□□□ 0.36
Atoh1P48985 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atoh1P48985 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Atoh1P48985 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.28■□□□□ 0.36
Atoh1P48985 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Gm27533-201ENSMUST00000183800 152 ntBASIC17.28■□□□□ 0.36
Atoh1P48985 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.28■□□□□ 0.36
Atoh1P48985 Gm18187-201ENSMUST00000196476 984 ntBASIC17.28■□□□□ 0.36
Atoh1P48985 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.28■□□□□ 0.36
Atoh1P48985 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atoh1P48985 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
Atoh1P48985 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atoh1P48985 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.28■□□□□ 0.36
Atoh1P48985 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atoh1P48985 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atoh1P48985 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.27■□□□□ 0.36
Atoh1P48985 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms