Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.31■□□□□ 0.04
LdlrP35951 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LdlrP35951 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Gm15372-201ENSMUST00000120729 834 ntBASIC15.3■□□□□ 0.04
LdlrP35951 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.3■□□□□ 0.04
LdlrP35951 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Gm18195-201ENSMUST00000207604 706 ntBASIC15.3■□□□□ 0.04
LdlrP35951 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.3■□□□□ 0.04
LdlrP35951 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LdlrP35951 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LdlrP35951 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LdlrP35951 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LdlrP35951 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.29■□□□□ 0.04
LdlrP35951 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LdlrP35951 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LdlrP35951 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LdlrP35951 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LdlrP35951 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.29■□□□□ 0.04
LdlrP35951 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LdlrP35951 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.29■□□□□ 0.04
LdlrP35951 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LdlrP35951 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LdlrP35951 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LdlrP35951 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.29■□□□□ 0.04
LdlrP35951 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LdlrP35951 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LdlrP35951 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LdlrP35951 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.28■□□□□ 0.04
LdlrP35951 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LdlrP35951 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LdlrP35951 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.28■□□□□ 0.04
LdlrP35951 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LdlrP35951 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LdlrP35951 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LdlrP35951 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LdlrP35951 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LdlrP35951 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.28■□□□□ 0.04
LdlrP35951 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LdlrP35951 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.27■□□□□ 0.04
LdlrP35951 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LdlrP35951 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LdlrP35951 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.27■□□□□ 0.04
LdlrP35951 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
LdlrP35951 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LdlrP35951 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
LdlrP35951 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.27■□□□□ 0.04
LdlrP35951 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LdlrP35951 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LdlrP35951 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LdlrP35951 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LdlrP35951 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LdlrP35951 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LdlrP35951 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LdlrP35951 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LdlrP35951 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms