Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.81■□□□□ 0.44
Pde6aP27664 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.81■□□□□ 0.44
Pde6aP27664 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.81■□□□□ 0.44
Pde6aP27664 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.81■□□□□ 0.44
Pde6aP27664 Gm27300-201ENSMUST00000184085 97 ntBASIC17.81■□□□□ 0.44
Pde6aP27664 Gm27335-201ENSMUST00000184758 97 ntBASIC17.81■□□□□ 0.44
Pde6aP27664 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.81■□□□□ 0.44
Pde6aP27664 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.81■□□□□ 0.44
Pde6aP27664 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Pde6aP27664 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.81■□□□□ 0.44
Pde6aP27664 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pde6aP27664 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.81■□□□□ 0.44
Pde6aP27664 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6aP27664 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pde6aP27664 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pde6aP27664 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.8■□□□□ 0.44
Pde6aP27664 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.8■□□□□ 0.44
Pde6aP27664 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pde6aP27664 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pde6aP27664 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6aP27664 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Pde6aP27664 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.79■□□□□ 0.44
Pde6aP27664 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pde6aP27664 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.79■□□□□ 0.44
Pde6aP27664 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pde6aP27664 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.79■□□□□ 0.44
Pde6aP27664 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.79■□□□□ 0.44
Pde6aP27664 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.79■□□□□ 0.44
Pde6aP27664 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.79■□□□□ 0.44
Pde6aP27664 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 AW822252-206ENSMUST00000208904 237 ntBASIC17.79■□□□□ 0.44
Pde6aP27664 Psmb5-202ENSMUST00000227257 622 ntBASIC17.79■□□□□ 0.44
Pde6aP27664 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.79■□□□□ 0.44
Pde6aP27664 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
Pde6aP27664 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pde6aP27664 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6aP27664 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.79■□□□□ 0.44
Pde6aP27664 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.79■□□□□ 0.44
Pde6aP27664 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6aP27664 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Pde6aP27664 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6aP27664 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6aP27664 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pde6aP27664 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pde6aP27664 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6aP27664 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.78■□□□□ 0.44
Pde6aP27664 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6aP27664 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.78■□□□□ 0.44
Pde6aP27664 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6aP27664 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms