Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpm3P21107 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tpm3P21107 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tpm3P21107 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Tpm3P21107 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tpm3P21107 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tpm3P21107 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Tpm3P21107 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Tpm3P21107 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tpm3P21107 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tpm3P21107 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.26■□□□□ 0.35
Tpm3P21107 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Tpm3P21107 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Tpm3P21107 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.26■□□□□ 0.35
Tpm3P21107 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Tpm3P21107 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.26■□□□□ 0.35
Tpm3P21107 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.26■□□□□ 0.35
Tpm3P21107 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.26■□□□□ 0.35
Tpm3P21107 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tpm3P21107 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Tpm3P21107 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Tpm3P21107 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tpm3P21107 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Tpm3P21107 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tpm3P21107 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.24■□□□□ 0.35
Tpm3P21107 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Tpm3P21107 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
Tpm3P21107 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.24■□□□□ 0.35
Tpm3P21107 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tpm3P21107 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tpm3P21107 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tpm3P21107 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Gm11336-201ENSMUST00000118168 334 ntBASIC17.24■□□□□ 0.35
Tpm3P21107 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.24■□□□□ 0.35
Tpm3P21107 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tpm3P21107 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Tpm3P21107 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.23■□□□□ 0.35
Tpm3P21107 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Tpm3P21107 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.23■□□□□ 0.35
Tpm3P21107 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tpm3P21107 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms