Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm17661-201ENSMUST00000170317 270 ntBASIC12.47□□□□□ -0.41
Cdx1P18111 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.47□□□□□ -0.41
Cdx1P18111 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Gm5587-201ENSMUST00000206270 674 ntBASIC12.47□□□□□ -0.41
Cdx1P18111 Gm9731-201ENSMUST00000209480 747 ntBASIC12.47□□□□□ -0.41
Cdx1P18111 Il3ra-202ENSMUST00000223589 738 ntBASIC12.47□□□□□ -0.41
Cdx1P18111 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.47□□□□□ -0.41
Cdx1P18111 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdx1P18111 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdx1P18111 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdx1P18111 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdx1P18111 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdx1P18111 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx1P18111 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.46□□□□□ -0.41
Cdx1P18111 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Cdx1P18111 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cdx1P18111 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.46□□□□□ -0.41
Cdx1P18111 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Cdx1P18111 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cdx1P18111 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdx1P18111 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Ank2-226ENSMUST00000189368 339 ntBASIC12.46□□□□□ -0.41
Cdx1P18111 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdx1P18111 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdx1P18111 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdx1P18111 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cdx1P18111 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx1P18111 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Cdx1P18111 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.46□□□□□ -0.42
Cdx1P18111 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Cdx1P18111 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx1P18111 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.45□□□□□ -0.42
Cdx1P18111 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdx1P18111 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Gm7370-201ENSMUST00000219471 767 ntBASIC12.45□□□□□ -0.42
Cdx1P18111 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Cdx1P18111 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdx1P18111 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx1P18111 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx1P18111 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Cdx1P18111 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms