Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.04■□□□□ 0.32
Hoxc6P10629 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.04■□□□□ 0.32
Hoxc6P10629 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Hoxc6P10629 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.04■□□□□ 0.32
Hoxc6P10629 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.04■□□□□ 0.32
Hoxc6P10629 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc6P10629 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hoxc6P10629 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.03■□□□□ 0.32
Hoxc6P10629 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hoxc6P10629 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.03■□□□□ 0.32
Hoxc6P10629 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hoxc6P10629 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hoxc6P10629 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc6P10629 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Hoxc6P10629 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hoxc6P10629 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.02■□□□□ 0.32
Hoxc6P10629 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
Hoxc6P10629 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
Hoxc6P10629 Gm27618-201ENSMUST00000183671 60 ntBASIC17.02■□□□□ 0.32
Hoxc6P10629 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.02■□□□□ 0.32
Hoxc6P10629 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.02■□□□□ 0.32
Hoxc6P10629 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc6P10629 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxc6P10629 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxc6P10629 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.02■□□□□ 0.31
Hoxc6P10629 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxc6P10629 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.01■□□□□ 0.31
Hoxc6P10629 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hoxc6P10629 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hoxc6P10629 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.01■□□□□ 0.31
Hoxc6P10629 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.01■□□□□ 0.31
Hoxc6P10629 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Gm16026-204ENSMUST00000162652 683 ntBASIC17.01■□□□□ 0.31
Hoxc6P10629 Gm5745-201ENSMUST00000183748 313 ntBASIC17.01■□□□□ 0.31
Hoxc6P10629 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.01■□□□□ 0.31
Hoxc6P10629 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hoxc6P10629 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.01■□□□□ 0.31
Hoxc6P10629 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Hoxc6P10629 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc6P10629 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hoxc6P10629 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Hoxc6P10629 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17■□□□□ 0.31
Hoxc6P10629 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17■□□□□ 0.31
Hoxc6P10629 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc6P10629 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hoxc6P10629 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms