Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Gm13453-201ENSMUST00000118708 357 ntBASIC16.29■□□□□ 0.2
Hoxc8P09025 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.29■□□□□ 0.2
Hoxc8P09025 Gm25144-201ENSMUST00000179561 110 ntBASIC16.29■□□□□ 0.2
Hoxc8P09025 Gm25352-201ENSMUST00000179815 110 ntBASIC16.29■□□□□ 0.2
Hoxc8P09025 Gm27437-201ENSMUST00000183429 107 ntBASIC16.29■□□□□ 0.2
Hoxc8P09025 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.29■□□□□ 0.2
Hoxc8P09025 Gm18766-201ENSMUST00000189811 808 ntBASIC16.29■□□□□ 0.2
Hoxc8P09025 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.29■□□□□ 0.2
Hoxc8P09025 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hoxc8P09025 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.29■□□□□ 0.2
Hoxc8P09025 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hoxc8P09025 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Hoxc8P09025 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.29■□□□□ 0.2
Hoxc8P09025 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hoxc8P09025 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.29■□□□□ 0.2
Hoxc8P09025 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc8P09025 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hoxc8P09025 Celf4-206ENSMUST00000224553 1729 ntBASIC16.28■□□□□ 0.2
Hoxc8P09025 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxc8P09025 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.28■□□□□ 0.2
Hoxc8P09025 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hoxc8P09025 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hoxc8P09025 Gm12151-201ENSMUST00000121374 290 ntBASIC16.28■□□□□ 0.2
Hoxc8P09025 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxc8P09025 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxc8P09025 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.28■□□□□ 0.2
Hoxc8P09025 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hoxc8P09025 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Hoxc8P09025 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc8P09025 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxc8P09025 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc8P09025 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc8P09025 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Hoxc8P09025 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Hoxc8P09025 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc8P09025 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Hoxc8P09025 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc8P09025 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.27■□□□□ 0.2
Hoxc8P09025 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc8P09025 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc8P09025 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc8P09025 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.27■□□□□ 0.2
Hoxc8P09025 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.27■□□□□ 0.2
Hoxc8P09025 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc8P09025 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.27■□□□□ 0.19
Hoxc8P09025 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc8P09025 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc8P09025 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc8P09025 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hoxc8P09025 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.26■□□□□ 0.19
Hoxc8P09025 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Hoxc8P09025 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hoxc8P09025 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.26■□□□□ 0.19
Hoxc8P09025 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Mir6977-201ENSMUST00000184960 64 ntBASIC16.26■□□□□ 0.19
Hoxc8P09025 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.26■□□□□ 0.19
Hoxc8P09025 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.26■□□□□ 0.19
Hoxc8P09025 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.26■□□□□ 0.19
Hoxc8P09025 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc8P09025 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms