Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Mir5126-201ENSMUST00000175513 77 ntBASIC14.07□□□□□ -0.16
P01852 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.07□□□□□ -0.16
P01852 Gm44771-201ENSMUST00000206975 626 ntBASIC14.07□□□□□ -0.16
P01852 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.07□□□□□ -0.16
P01852 AV026068-213ENSMUST00000223675 1171 ntBASIC14.07□□□□□ -0.16
P01852 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P01852 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
P01852 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
P01852 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
P01852 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
P01852 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.06□□□□□ -0.16
P01852 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
P01852 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.06□□□□□ -0.16
P01852 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.06□□□□□ -0.16
P01852 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.06□□□□□ -0.16
P01852 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.06□□□□□ -0.16
P01852 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
P01852 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
P01852 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.05□□□□□ -0.16
P01852 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.05□□□□□ -0.16
P01852 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.05□□□□□ -0.16
P01852 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
P01852 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
P01852 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P01852 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
P01852 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.04□□□□□ -0.16
P01852 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.04□□□□□ -0.16
P01852 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.04□□□□□ -0.16
P01852 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
P01852 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
P01852 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms