Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.91□□□□□ -0.66
Sh2d1aO88890 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.91□□□□□ -0.66
Sh2d1aO88890 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Gm1818-201ENSMUST00000169406 1184 ntBASIC10.91□□□□□ -0.66
Sh2d1aO88890 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.91□□□□□ -0.66
Sh2d1aO88890 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.9□□□□□ -0.66
Sh2d1aO88890 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Rprl3-201ENSMUST00000157400 290 ntBASIC10.9□□□□□ -0.66
Sh2d1aO88890 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Gm6257-201ENSMUST00000163864 910 ntBASIC10.9□□□□□ -0.66
Sh2d1aO88890 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Mir3081-201ENSMUST00000175305 84 ntBASIC10.9□□□□□ -0.66
Sh2d1aO88890 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh2d1aO88890 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sh2d1aO88890 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sh2d1aO88890 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Sh2d1aO88890 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sh2d1aO88890 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sh2d1aO88890 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
Sh2d1aO88890 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms