Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.24□□□□□ -0.13
Cops4O88544 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cops4O88544 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.24□□□□□ -0.13
Cops4O88544 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cops4O88544 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cops4O88544 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.24□□□□□ -0.13
Cops4O88544 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cops4O88544 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cops4O88544 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Cops4O88544 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cops4O88544 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cops4O88544 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.23□□□□□ -0.13
Cops4O88544 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.23□□□□□ -0.13
Cops4O88544 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.23□□□□□ -0.13
Cops4O88544 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.23□□□□□ -0.13
Cops4O88544 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.23□□□□□ -0.13
Cops4O88544 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Cops4O88544 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Cops4O88544 Gm10252-201ENSMUST00000209541 832 ntBASIC14.23□□□□□ -0.13
Cops4O88544 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cops4O88544 Gm18101-201ENSMUST00000215769 548 ntBASIC14.23□□□□□ -0.13
Cops4O88544 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cops4O88544 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cops4O88544 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cops4O88544 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Cops4O88544 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cops4O88544 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Cops4O88544 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Cops4O88544 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops4O88544 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cops4O88544 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cops4O88544 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cops4O88544 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.22□□□□□ -0.13
Cops4O88544 Gm22697-201ENSMUST00000175194 63 ntBASIC14.22□□□□□ -0.13
Cops4O88544 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cops4O88544 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.22□□□□□ -0.13
Cops4O88544 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.22□□□□□ -0.13
Cops4O88544 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops4O88544 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cops4O88544 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cops4O88544 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cops4O88544 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Gm6433-201ENSMUST00000118634 875 ntBASIC14.21□□□□□ -0.13
Cops4O88544 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.21□□□□□ -0.13
Cops4O88544 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cops4O88544 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Gm21559-201ENSMUST00000220638 855 ntBASIC14.21□□□□□ -0.13
Cops4O88544 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Gm8587-201ENSMUST00000076538 843 ntBASIC14.21□□□□□ -0.13
Cops4O88544 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms