Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.17□□□□□ -0.46
Pde6dO55057 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pde6dO55057 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pde6dO55057 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pde6dO55057 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pde6dO55057 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Pde6dO55057 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.16□□□□□ -0.46
Pde6dO55057 Gm6257-201ENSMUST00000163864 910 ntBASIC12.16□□□□□ -0.46
Pde6dO55057 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.16□□□□□ -0.46
Pde6dO55057 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.16□□□□□ -0.46
Pde6dO55057 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pde6dO55057 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pde6dO55057 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.16□□□□□ -0.46
Pde6dO55057 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.16□□□□□ -0.46
Pde6dO55057 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.16□□□□□ -0.46
Pde6dO55057 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pde6dO55057 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Pde6dO55057 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pde6dO55057 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pde6dO55057 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pde6dO55057 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pde6dO55057 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Pde6dO55057 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.15□□□□□ -0.46
Pde6dO55057 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pde6dO55057 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pde6dO55057 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.15□□□□□ -0.46
Pde6dO55057 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.15□□□□□ -0.46
Pde6dO55057 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.15□□□□□ -0.46
Pde6dO55057 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
Pde6dO55057 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.15□□□□□ -0.46
Pde6dO55057 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pde6dO55057 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Pde6dO55057 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pde6dO55057 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pde6dO55057 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Pde6dO55057 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pde6dO55057 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pde6dO55057 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.15□□□□□ -0.47
Pde6dO55057 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Pde6dO55057 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pde6dO55057 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pde6dO55057 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pde6dO55057 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms