Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Gm25406-201ENSMUST00000157599 105 ntBASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh1F7BJK1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Gm13836-201ENSMUST00000121159 501 ntBASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh1F7BJK1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh1F7BJK1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms