Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.59■□□□□ 0.09
Ccdc149F6V035 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.59■□□□□ 0.09
Ccdc149F6V035 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Gm10499-201ENSMUST00000174094 934 ntBASIC15.59■□□□□ 0.09
Ccdc149F6V035 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.59■□□□□ 0.09
Ccdc149F6V035 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.59■□□□□ 0.09
Ccdc149F6V035 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc149F6V035 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc149F6V035 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc149F6V035 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc149F6V035 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.58■□□□□ 0.09
Ccdc149F6V035 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ccdc149F6V035 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc149F6V035 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Gm14701-201ENSMUST00000117156 348 ntBASIC15.58■□□□□ 0.08
Ccdc149F6V035 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Gm45612-201ENSMUST00000211320 160 ntBASIC15.58■□□□□ 0.08
Ccdc149F6V035 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ccdc149F6V035 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.58■□□□□ 0.08
Ccdc149F6V035 Dancr-204ENSMUST00000132389 2347 ntBASIC15.58■□□□□ 0.08
Ccdc149F6V035 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc149F6V035 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.57■□□□□ 0.08
Ccdc149F6V035 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.57■□□□□ 0.08
Ccdc149F6V035 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.57■□□□□ 0.08
Ccdc149F6V035 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc149F6V035 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.56■□□□□ 0.08
Ccdc149F6V035 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.56■□□□□ 0.08
Ccdc149F6V035 Gm2272-201ENSMUST00000194903 582 ntBASIC15.56■□□□□ 0.08
Ccdc149F6V035 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ccdc149F6V035 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms