Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Gm18489-201ENSMUST00000172565 551 ntBASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Gm9682-201ENSMUST00000197505 556 ntBASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh17E9PXF0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Gm7787-201ENSMUST00000216858 688 ntBASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh17E9PXF0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms