Protein–RNA interactions for Protein: C0HKC9

Smok3b, Sperm motility kinase 3B, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smok3bC0HKC9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smok3bC0HKC9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smok3bC0HKC9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Gm9013-201ENSMUST00000132939 882 ntBASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smok3bC0HKC9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Gm12134-201ENSMUST00000122109 520 ntBASIC15.3■□□□□ 0.04
Smok3bC0HKC9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smok3bC0HKC9 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms