Protein–RNA interactions for Protein: A0A0G2JDF5

Trav14n-2, T cell receptor alpha variable 14D-2 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-2A0A0G2JDF5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.27□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav14n-2A0A0G2JDF5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trav14n-2A0A0G2JDF5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gm6257-201ENSMUST00000163864 910 ntBASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gm11539-201ENSMUST00000119837 557 ntBASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav14n-2A0A0G2JDF5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms