Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm15378-201ENSMUST00000121894 207 ntBASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm20049-201ENSMUST00000219950 730 ntBASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Timm23-208ENSMUST00000226683 750 ntBASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms