Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm8495-201ENSMUST00000188740 694 ntBASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm44430-201ENSMUST00000203376 995 ntBASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv3A0A0A6YYE2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Mir1199-201ENSMUST00000117015 119 ntBASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm13474-201ENSMUST00000122466 815 ntBASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms