Protein–RNA interactions for Protein: Q9WUP1

Ramp3, Receptor activity-modifying protein 3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ramp3Q9WUP1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ramp3Q9WUP1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ramp3Q9WUP1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ramp3Q9WUP1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ramp3Q9WUP1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ramp3Q9WUP1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.67□□□□□ -0.22
Ramp3Q9WUP1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Gm25925-201ENSMUST00000158314 306 ntBASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ramp3Q9WUP1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.65□□□□□ -0.22
Ramp3Q9WUP1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ramp3Q9WUP1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ramp3Q9WUP1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ramp3Q9WUP1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ramp3Q9WUP1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ramp3Q9WUP1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.64□□□□□ -0.23
Ramp3Q9WUP1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms