Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3aQ9JKX8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3aQ9JKX8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3aQ9JKX8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.78□□□□□ -0.04
Upk3aQ9JKX8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms