Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm18737-201ENSMUST00000173594 937 ntBASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scn5aQ9JJV9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Gm16026-204ENSMUST00000162652 683 ntBASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Gm27680-201ENSMUST00000184192 160 ntBASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Scn5aQ9JJV9 Gm14719-201ENSMUST00000121891 340 ntBASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Gm27437-201ENSMUST00000183429 107 ntBASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Scn5aQ9JJV9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Gm15483-201ENSMUST00000120338 456 ntBASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn5aQ9JJV9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Gm43767-201ENSMUST00000198933 381 ntBASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn5aQ9JJV9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn5aQ9JJV9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn5aQ9JJV9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn5aQ9JJV9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn5aQ9JJV9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms