Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd3l1Q9D9H3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Mbd3l1Q9D9H3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mbd3l1Q9D9H3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mbd3l1Q9D9H3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mbd3l1Q9D9H3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Gm11927-201ENSMUST00000118472 759 ntBASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Gm44549-201ENSMUST00000208351 577 ntBASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mbd3l1Q9D9H3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Gm12008-201ENSMUST00000117791 755 ntBASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Mbd3l1Q9D9H3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Mbd3l1Q9D9H3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Mbd3l1Q9D9H3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mbd3l1Q9D9H3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms