Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Mir7070-201ENSMUST00000183657 86 ntBASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gm12341-201ENSMUST00000119724 503 ntBASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gm13350-201ENSMUST00000120519 479 ntBASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gm7584-201ENSMUST00000175829 940 ntBASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gm27486-201ENSMUST00000184923 80 ntBASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gm43822-201ENSMUST00000200285 476 ntBASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gm6013-201ENSMUST00000212264 699 ntBASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lysmd1Q9D0E3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.33■□□□□ 0.21
Lysmd1Q9D0E3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Lysmd1Q9D0E3 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.33■□□□□ 0.21
Lysmd1Q9D0E3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Gm16476-201ENSMUST00000221544 139 ntBASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd1Q9D0E3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Haglr-201ENSMUST00000100000 2085 ntBASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Gm15808-201ENSMUST00000119046 604 ntBASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Gm7593-201ENSMUST00000187246 644 ntBASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms