Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Gm45328-201ENSMUST00000210942 917 ntBASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Gm29518-201ENSMUST00000190858 372 ntBASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssr1Q9CY50 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 AA414768-201ENSMUST00000121924 1257 ntBASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssr1Q9CY50 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Mir6404-201ENSMUST00000183699 94 ntBASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms