Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clp1Q99LI9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Mir8102-201ENSMUST00000184148 139 ntBASIC16.21■□□□□ 0.19
Clp1Q99LI9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.21■□□□□ 0.19
Clp1Q99LI9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.21■□□□□ 0.19
Clp1Q99LI9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clp1Q99LI9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clp1Q99LI9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clp1Q99LI9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.21■□□□□ 0.18
Clp1Q99LI9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Gm13453-201ENSMUST00000118708 357 ntBASIC16.2■□□□□ 0.18
Clp1Q99LI9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Gm38225-201ENSMUST00000194001 393 ntBASIC16.2■□□□□ 0.18
Clp1Q99LI9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clp1Q99LI9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.19■□□□□ 0.18
Clp1Q99LI9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.19■□□□□ 0.18
Clp1Q99LI9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Mir7684-201ENSMUST00000183858 60 ntBASIC16.19■□□□□ 0.18
Clp1Q99LI9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clp1Q99LI9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.18■□□□□ 0.18
Clp1Q99LI9 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.18■□□□□ 0.18
Clp1Q99LI9 Gm27989-201ENSMUST00000184721 107 ntBASIC16.18■□□□□ 0.18
Clp1Q99LI9 Gm17837-201ENSMUST00000186435 985 ntBASIC16.18■□□□□ 0.18
Clp1Q99LI9 Gm38294-201ENSMUST00000192831 381 ntBASIC16.18■□□□□ 0.18
Clp1Q99LI9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.18■□□□□ 0.18
Clp1Q99LI9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clp1Q99LI9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clp1Q99LI9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms