Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm11025-201ENSMUST00000140773 466 ntBASIC18.15■□□□□ 0.5
Col20a1Q923P0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col20a1Q923P0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Gm16198-201ENSMUST00000118766 670 ntBASIC18.14■□□□□ 0.49
Col20a1Q923P0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.14■□□□□ 0.49
Col20a1Q923P0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.14■□□□□ 0.49
Col20a1Q923P0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.14■□□□□ 0.49
Col20a1Q923P0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col20a1Q923P0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col20a1Q923P0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.13■□□□□ 0.49
Col20a1Q923P0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col20a1Q923P0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col20a1Q923P0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.12■□□□□ 0.49
Col20a1Q923P0 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.12■□□□□ 0.49
Col20a1Q923P0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col20a1Q923P0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Rpph1-201ENSMUST00000175096 319 ntBASIC18.11■□□□□ 0.49
Col20a1Q923P0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col20a1Q923P0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col20a1Q923P0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms