Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga11Q91XY8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga11Q91XY8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga11Q91XY8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga11Q91XY8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga11Q91XY8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms