Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Brd8Q8R3B7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brd8Q8R3B7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Gm45167-201ENSMUST00000208007 322 ntBASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Psmb5-202ENSMUST00000227257 622 ntBASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brd8Q8R3B7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.71■□□□□ 0.11
Brd8Q8R3B7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Gm43514-201ENSMUST00000198852 424 ntBASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Gm18206-201ENSMUST00000207027 926 ntBASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Brd8Q8R3B7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms