Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Syne4Q8CII8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Syne4Q8CII8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.39■□□□□ 0.37
Syne4Q8CII8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.39■□□□□ 0.37
Syne4Q8CII8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.39■□□□□ 0.37
Syne4Q8CII8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.38■□□□□ 0.37
Syne4Q8CII8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Syne4Q8CII8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Syne4Q8CII8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.37■□□□□ 0.37
Syne4Q8CII8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Mir7684-201ENSMUST00000183858 60 ntBASIC17.37■□□□□ 0.37
Syne4Q8CII8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Syne4Q8CII8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Syne4Q8CII8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Syne4Q8CII8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.35■□□□□ 0.37
Syne4Q8CII8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.35■□□□□ 0.37
Syne4Q8CII8 Gm15483-201ENSMUST00000120338 456 ntBASIC17.35■□□□□ 0.37
Syne4Q8CII8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.35■□□□□ 0.37
Syne4Q8CII8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.35■□□□□ 0.37
Syne4Q8CII8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Syne4Q8CII8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne4Q8CII8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms