Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Gm8318-201ENSMUST00000182954 872 ntBASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf31Q8CCF0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Gm4995-201ENSMUST00000117247 432 ntBASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf31Q8CCF0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf31Q8CCF0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf31Q8CCF0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Mir3113-201ENSMUST00000175478 76 ntBASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf31Q8CCF0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Gm13597-201ENSMUST00000121239 375 ntBASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Mir8117-201ENSMUST00000184773 107 ntBASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf31Q8CCF0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 App-207ENSMUST00000227737 2827 ntBASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.81■□□□□ 0.28
Prpf31Q8CCF0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms