Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rd3Q8BRE0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Thap2-203ENSMUST00000218989 527 ntBASIC16.32■□□□□ 0.2
Rd3Q8BRE0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rd3Q8BRE0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Mir6956-201ENSMUST00000183598 62 ntBASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Gm7063-201ENSMUST00000186840 981 ntBASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.31■□□□□ 0.2
Rd3Q8BRE0 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.31■□□□□ 0.2
Rd3Q8BRE0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Gm11745-201ENSMUST00000121669 448 ntBASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rd3Q8BRE0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Gm44872-201ENSMUST00000207864 420 ntBASIC16.29■□□□□ 0.2
Rd3Q8BRE0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms