Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ckap4Q8BMK4 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ckap4Q8BMK4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ckap4Q8BMK4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ckap4Q8BMK4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Gm14859-201ENSMUST00000117752 357 ntBASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Gm33142-201ENSMUST00000193913 867 ntBASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ckap4Q8BMK4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms