Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Csmd3Q80T79 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Csmd3Q80T79 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Csmd3Q80T79 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Csmd3Q80T79 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Csmd3Q80T79 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Csmd3Q80T79 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Csmd3Q80T79 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.43□□□□□ -0.74
Csmd3Q80T79 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Csmd3Q80T79 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Csmd3Q80T79 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.42□□□□□ -0.74
Csmd3Q80T79 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.42□□□□□ -0.74
Csmd3Q80T79 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Csmd3Q80T79 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.41□□□□□ -0.74
Csmd3Q80T79 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Gm44344-201ENSMUST00000200287 129 ntBASIC10.41□□□□□ -0.74
Csmd3Q80T79 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Gm4875-201ENSMUST00000118257 786 ntBASIC10.41□□□□□ -0.74
Csmd3Q80T79 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Csmd3Q80T79 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms