Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx4Q7TNK1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx4Q7TNK1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx4Q7TNK1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rfx4Q7TNK1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx4Q7TNK1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx4Q7TNK1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Mir5122-201ENSMUST00000175004 89 ntBASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx4Q7TNK1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Efs-202ENSMUST00000227037 2540 ntBASIC14.82□□□□□ -0.04
Rfx4Q7TNK1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfx4Q7TNK1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.8□□□□□ -0.04
Rfx4Q7TNK1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms