Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Kdm3aQ6PCM1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Kdm3aQ6PCM1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kdm3aQ6PCM1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kdm3aQ6PCM1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kdm3aQ6PCM1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kdm3aQ6PCM1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kdm3aQ6PCM1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kdm3aQ6PCM1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kdm3aQ6PCM1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Gm5867-201ENSMUST00000063197 592 ntBASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.51■□□□□ 0.55
Kdm3aQ6PCM1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Kdm3aQ6PCM1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm3aQ6PCM1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms