Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Abcf1Q6P542 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcf1Q6P542 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abcf1Q6P542 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Gm27357-201ENSMUST00000183754 135 ntBASIC17.28■□□□□ 0.36
Abcf1Q6P542 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.28■□□□□ 0.36
Abcf1Q6P542 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abcf1Q6P542 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.27■□□□□ 0.36
Abcf1Q6P542 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abcf1Q6P542 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Abcf1Q6P542 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abcf1Q6P542 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abcf1Q6P542 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abcf1Q6P542 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Abcf1Q6P542 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Abcf1Q6P542 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Abcf1Q6P542 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Gm44430-201ENSMUST00000203376 995 ntBASIC17.26■□□□□ 0.35
Abcf1Q6P542 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Abcf1Q6P542 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms