Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Cpsf6Q6NVF9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Gm4459-201ENSMUST00000118750 468 ntBASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 BC037039-201ENSMUST00000192003 2205 ntBASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cpsf6Q6NVF9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Gm18622-201ENSMUST00000219361 595 ntBASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cpsf6Q6NVF9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.96□□□□□ -0.02
Cpsf6Q6NVF9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cpsf6Q6NVF9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cpsf6Q6NVF9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Gm12497-201ENSMUST00000138778 237 ntBASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf6Q6NVF9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf6Q6NVF9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf6Q6NVF9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf6Q6NVF9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms