Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Clcn1Q64347 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.47■□□□□ 0.71
Clcn1Q64347 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Clcn1Q64347 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.47■□□□□ 0.71
Clcn1Q64347 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Clcn1Q64347 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Clcn1Q64347 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.47■□□□□ 0.71
Clcn1Q64347 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Clcn1Q64347 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn1Q64347 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.46■□□□□ 0.71
Clcn1Q64347 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clcn1Q64347 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.46■□□□□ 0.71
Clcn1Q64347 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.46■□□□□ 0.71
Clcn1Q64347 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Clcn1Q64347 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.46■□□□□ 0.71
Clcn1Q64347 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Clcn1Q64347 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn1Q64347 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clcn1Q64347 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.45■□□□□ 0.7
Clcn1Q64347 Gm43125-201ENSMUST00000201724 730 ntBASIC19.45■□□□□ 0.7
Clcn1Q64347 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Clcn1Q64347 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Clcn1Q64347 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.45■□□□□ 0.7
Clcn1Q64347 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Clcn1Q64347 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.45■□□□□ 0.7
Clcn1Q64347 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn1Q64347 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcn1Q64347 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Clcn1Q64347 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Clcn1Q64347 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Clcn1Q64347 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.44■□□□□ 0.7
Clcn1Q64347 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.44■□□□□ 0.7
Clcn1Q64347 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clcn1Q64347 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcn1Q64347 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn1Q64347 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.44■□□□□ 0.7
Clcn1Q64347 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clcn1Q64347 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clcn1Q64347 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Clcn1Q64347 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.43■□□□□ 0.7
Clcn1Q64347 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clcn1Q64347 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.43■□□□□ 0.7
Clcn1Q64347 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.43■□□□□ 0.7
Clcn1Q64347 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Clcn1Q64347 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms