Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.06■□□□□ 0
Col12a1Q60847 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col12a1Q60847 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.06■□□□□ 0
Col12a1Q60847 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.05■□□□□ 0
Col12a1Q60847 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col12a1Q60847 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.05■□□□□ 0
Col12a1Q60847 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Col12a1Q60847 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col12a1Q60847 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.05■□□□□ -0
Col12a1Q60847 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
Col12a1Q60847 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.05■□□□□ -0
Col12a1Q60847 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.05■□□□□ -0
Col12a1Q60847 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.05■□□□□ -0
Col12a1Q60847 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Gm38241-201ENSMUST00000192641 898 ntBASIC15.05■□□□□ -0
Col12a1Q60847 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.05■□□□□ -0
Col12a1Q60847 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col12a1Q60847 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.04■□□□□ -0
Col12a1Q60847 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.04■□□□□ -0
Col12a1Q60847 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.04■□□□□ -0
Col12a1Q60847 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.04■□□□□ -0
Col12a1Q60847 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.04■□□□□ -0
Col12a1Q60847 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col12a1Q60847 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.04■□□□□ -0
Col12a1Q60847 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.04■□□□□ -0
Col12a1Q60847 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col12a1Q60847 Gm15806-201ENSMUST00000120696 955 ntBASIC15.03■□□□□ -0
Col12a1Q60847 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.03■□□□□ -0
Col12a1Q60847 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.03■□□□□ -0
Col12a1Q60847 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.03■□□□□ -0
Col12a1Q60847 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col12a1Q60847 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.03■□□□□ -0
Col12a1Q60847 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.03■□□□□ -0
Col12a1Q60847 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Gm10478-201ENSMUST00000084451 396 ntBASIC15.03■□□□□ -0
Col12a1Q60847 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.03■□□□□ -0
Col12a1Q60847 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col12a1Q60847 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col12a1Q60847 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col12a1Q60847 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Col12a1Q60847 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.02■□□□□ -0
Col12a1Q60847 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.02■□□□□ -0
Col12a1Q60847 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.02■□□□□ -0
Col12a1Q60847 Gm12091-201ENSMUST00000146791 830 ntBASIC15.02■□□□□ -0
Col12a1Q60847 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col12a1Q60847 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Col12a1Q60847 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col12a1Q60847 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.02□□□□□ -0.01
Col12a1Q60847 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.02□□□□□ -0.01
Col12a1Q60847 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms