Protein–RNA interactions for Protein: Q5XF89

Atp13a3, Probable cation-transporting ATPase 13A3, mousemouse

Predictions only

Length 1,219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a3Q5XF89 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Gm10154-201ENSMUST00000084445 354 ntBASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.36■□□□□ 0.37
Atp13a3Q5XF89 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.35■□□□□ 0.37
Atp13a3Q5XF89 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a3Q5XF89 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Atp13a3Q5XF89 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a3Q5XF89 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a3Q5XF89 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a3Q5XF89 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a3Q5XF89 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Gm18889-201ENSMUST00000174284 929 ntBASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a3Q5XF89 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Rprl2-201ENSMUST00000157150 290 ntBASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Mir6990-201ENSMUST00000183724 91 ntBASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a3Q5XF89 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms