Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nhej1Q3KNJ2 Gm14722-201ENSMUST00000118943 689 ntBASIC16.46■□□□□ 0.23
Nhej1Q3KNJ2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.46■□□□□ 0.23
Nhej1Q3KNJ2 Gm17808-201ENSMUST00000200859 894 ntBASIC16.46■□□□□ 0.23
Nhej1Q3KNJ2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nhej1Q3KNJ2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nhej1Q3KNJ2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nhej1Q3KNJ2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nhej1Q3KNJ2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.46■□□□□ 0.22
Nhej1Q3KNJ2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Nhej1Q3KNJ2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nhej1Q3KNJ2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Nhej1Q3KNJ2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Gm29518-201ENSMUST00000190858 372 ntBASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Gm9172-201ENSMUST00000212092 954 ntBASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nhej1Q3KNJ2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Rprl3-201ENSMUST00000157400 290 ntBASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nhej1Q3KNJ2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nhej1Q3KNJ2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nhej1Q3KNJ2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nhej1Q3KNJ2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nhej1Q3KNJ2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nhej1Q3KNJ2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nhej1Q3KNJ2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Nhej1Q3KNJ2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms